Congratulations!!! (7 pages and still going strong)
I'm the happy owner of old spec Nitrons and did some measuring and calculating before and after fitting, so I feel I can add to the confusion with some confidence. If the wishbone articulation from top to bottom is really 435 to 325 mm (I have no reason to doubt this, but will measure it this weekend) and you design a shock with about 90 mm useable travel, it does stand to reason that all that travel should be within the articulation limits of the wishbones. My Nitron's go from 395 mm open length to about 305 closed (that includes 2mm bumpstop compression). At the closed end, that's outside the wishbone articulation limits. There is still more than room enough at the full open end. I call that a specification or a design error, as you can not use the full travel of the shock and there is no reason not to. All you have to do is make the body 20-25mm longer. And this is regardless of everything else that comes to play. I'm very willing to listen to anything that says this statement is BS, but with the measured values, that's all I can make of it.
And now for something entirely different: the amount of travel of the shock that you actually use may very well be within the limits even set by a shock that is not using the optimum in wishbone articulation. That will depend on spring rating and damping settings of the shocks, but in most cases I guess it will be given that most owners of such shocks are quite happy with them. Me amongst them. Although I have to say that I would prefer my shocks to be 20-25 mm longer, as this would give me more freedom to play with settings.